WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59E9AL.36.1 Sequence Name  Y59E9AL.36.1
Length (nt)  1841   Chromosome Location  IV: 5207109-5209481
Chromosome . Primary Identifier  IV Chromosome Location . Start  5207109
Chromosome Location . End  5209481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59E9AL.36.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00195093 Y59E9AL.36 Y59E9AL.36 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59E9AL.36 Y59E9AL.36 1668   IV: 5207272-5207730

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59E9AL.36.1 5207109 5209481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121616   622   IV: 5207109-5207730 Caenorhabditis elegans
Exon121617   524   IV: 5207884-5208407 Caenorhabditis elegans
Exon121618   280   IV: 5208578-5208857 Caenorhabditis elegans
Exon121619   56   IV: 5208908-5208963 Caenorhabditis elegans
Exon121620   82   IV: 5209013-5209094 Caenorhabditis elegans
Exon121621   146   IV: 5209151-5209296 Caenorhabditis elegans
Exon121622   131   IV: 5209351-5209481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59E9AL.36.1 5207109 5209481 -1

1 Sequence

Length
1841

1 Sequence Ontology Term

Identifier Name Description
transcript