WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y4C6B.3c.1 Sequence Name  Y4C6B.3c.1
Length (nt)  438   Chromosome Location  IV: 5335668-5336623
Chromosome . Primary Identifier  IV Chromosome Location . Start  5335668
Chromosome Location . End  5336623 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y4C6B.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021157 Y4C6B.3 Y4C6B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y4C6B.3c Y4C6B.3c 438   IV: 5335668-5335735

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y4C6B.3c.1 5335668 5336623 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121960   68   IV: 5335668-5335735 Caenorhabditis elegans
Exon121963   111   IV: 5335790-5335900 Caenorhabditis elegans
Exon121966   154   IV: 5335949-5336102 Caenorhabditis elegans
Exon121971   105   IV: 5336519-5336623 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y4C6B.3c.1 5335668 5336623 1

1 Sequence

Length
438

1 Sequence Ontology Term

Identifier Name Description
transcript