WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41H10.6c.1 Sequence Name  F41H10.6c.1
Length (nt)  3005   Chromosome Location  IV: 5356543-5364283
Chromosome . Primary Identifier  IV Chromosome Location . Start  5356543
Chromosome Location . End  5364283 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41H10.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018319 hda-6 F41H10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41H10.6c F41H10.6c 2874   IV: 5356612-5356803

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.6c.1 5356543 5364283 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon122106   261   IV: 5356543-5356803 Caenorhabditis elegans
Exon122111   288   IV: 5357135-5357422 Caenorhabditis elegans
Exon122115   282   IV: 5357876-5358157 Caenorhabditis elegans
Exon122118   363   IV: 5358670-5359032 Caenorhabditis elegans
Exon122121   135   IV: 5359092-5359226 Caenorhabditis elegans
Exon122131   460   IV: 5362176-5362635 Caenorhabditis elegans
Exon122134   555   IV: 5362931-5363485 Caenorhabditis elegans
Exon122137   275   IV: 5363536-5363810 Caenorhabditis elegans
Exon122140   288   IV: 5363854-5364141 Caenorhabditis elegans
Exon122142   98   IV: 5364186-5364283 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41H10.6c.1 5356543 5364283 -1

1 Sequence

Length
3005

1 Sequence Ontology Term

Identifier Name Description
transcript