WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y4C6A.2d Sequence Name  Y4C6A.2d
Length (nt)  3027   Chromosome Location  IV: 5439075-5439391
Chromosome . Primary Identifier  IV Chromosome Location . Start  5439075
Chromosome Location . End  5439391
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y4C6A.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49405 MGL-3, isoform d 112.5 1008 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00057056
WBRNAi00020813
WBRNAi00024234
WBRNAi00023359
WBRNAi00023872
WBRNAi00024159

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y4C6A.2d 5439075 5439391 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021152 mgl-3 Y4C6A.2 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y4C6A.2d 5439075 5439391 1
CDS:Y4C6A.2d 5440994 5441180 1
CDS:Y4C6A.2d 5441730 5441846 1
CDS:Y4C6A.2d 5441895 5442055 1
CDS:Y4C6A.2d 5442374 5442514 1
CDS:Y4C6A.2d 5443713 5443962 1
CDS:Y4C6A.2d 5444074 5444242 1
CDS:Y4C6A.2d 5444626 5444920 1
CDS:Y4C6A.2d 5445482 5445559 1
CDS:Y4C6A.2d 5445607 5445712 1
CDS:Y4C6A.2d 5446125 5446241 1
CDS:Y4C6A.2d 5446287 5446409 1
CDS:Y4C6A.2d 5446713 5447033 1
CDS:Y4C6A.2d 5447154 5447228 1
CDS:Y4C6A.2d 5447983 5448074 1
CDS:Y4C6A.2d 5448200 5448273 1
CDS:Y4C6A.2d 5448361 5448483 1
CDS:Y4C6A.2d 5450364 5450644 1

1 Sequence

Length
3027

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y4C6A.2d.1 Y4C6A.2d.1 3250   IV: 5439005-5450797