WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06E7.1a Sequence Name  C06E7.1a
Length (nt)  1215   Chromosome Location  IV: 5848688-5848759
Chromosome . Primary Identifier  IV Chromosome Location . Start  5848688
Chromosome Location . End  5848759
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03957 SAMS-3, isoform a 44.0 404 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00073923
WBRNAi00073924
WBRNAi00073925
WBRNAi00073926
WBRNAi00073927
WBRNAi00073928
WBRNAi00073929
WBRNAi00039912
WBRNAi00024488
WBRNAi00027160
WBRNAi00072347
WBRNAi00010320
WBRNAi00072348
WBRNAi00097217
WBRNAi00081796
WBRNAi00081827
WBRNAi00028583
WBRNAi00081873
WBRNAi00062006
WBRNAi00097262
WBRNAi00097307
WBRNAi00097352
WBRNAi00081910
WBRNAi00081920
WBRNAi00106976

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06E7.1a 5848688 5848759 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015538 sams-3 C06E7.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06E7.1a 5848688 5848759 1
CDS:C06E7.1a 5848888 5848948 1
CDS:C06E7.1a 5849318 5849440 1
CDS:C06E7.1a 5849542 5849924 1
CDS:C06E7.1a 5849976 5850385 1
CDS:C06E7.1a 5850432 5850597 1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06E7.1a.1 C06E7.1a.1 1492   IV: 5848657-5850843