WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H04M03.1.1 Sequence Name  H04M03.1.1
Length (nt)  1981   Chromosome Location  IV: 5896641-5899112
Chromosome . Primary Identifier  IV Chromosome Location . Start  5896641
Chromosome Location . End  5899112 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H04M03.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019151 pck-3 H04M03.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H04M03.1 H04M03.1 1875   IV: 5896688-5896715

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.1.1 5896641 5899112 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon124232   75   IV: 5896641-5896715 Caenorhabditis elegans
Exon124233   625   IV: 5896763-5897387 Caenorhabditis elegans
Exon124234   293   IV: 5897532-5897824 Caenorhabditis elegans
Exon124235   92   IV: 5897871-5897962 Caenorhabditis elegans
Exon124237   361   IV: 5898115-5898475 Caenorhabditis elegans
Exon124238   247   IV: 5898526-5898772 Caenorhabditis elegans
Exon124239   288   IV: 5898825-5899112 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H04M03.1.1 5896641 5899112 1

1 Sequence

Length
1981

1 Sequence Ontology Term

Identifier Name Description
transcript