WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49A9.3.1 Sequence Name  C49A9.3.1
Length (nt)  1955   Chromosome Location  IV: 6222089-6225009
Chromosome . Primary Identifier  IV Chromosome Location . Start  6222089
Chromosome Location . End  6225009 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49A9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016757 C49A9.3 C49A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49A9.3 C49A9.3 1722   IV: 6222407-6222495

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49A9.3.1 6222089 6225009 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126185   122   IV: 6222089-6222210 Caenorhabditis elegans
Exon126187   97   IV: 6222399-6222495 Caenorhabditis elegans
Exon126188   172   IV: 6222542-6222713 Caenorhabditis elegans
Exon126189   131   IV: 6222759-6222889 Caenorhabditis elegans
Exon126190   139   IV: 6223093-6223231 Caenorhabditis elegans
Exon126191   138   IV: 6223281-6223418 Caenorhabditis elegans
Exon126192   77   IV: 6223466-6223542 Caenorhabditis elegans
Exon126193   73   IV: 6223608-6223680 Caenorhabditis elegans
Exon126194   156   IV: 6223729-6223884 Caenorhabditis elegans
Exon126195   125   IV: 6223936-6224060 Caenorhabditis elegans
Exon126197   219   IV: 6224169-6224387 Caenorhabditis elegans
Exon126198   244   IV: 6224458-6224701 Caenorhabditis elegans
Exon126199   262   IV: 6224748-6225009 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49A9.3.1 6222089 6225009 1

1 Sequence

Length
1955

1 Sequence Ontology Term

Identifier Name Description
transcript