WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58F9.4.1 Sequence Name  F58F9.4.1
Length (nt)  1189   Chromosome Location  IV: 6231023-6232607
Chromosome . Primary Identifier  IV Chromosome Location . Start  6231023
Chromosome Location . End  6232607 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58F9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019058 F58F9.4 F58F9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58F9.4 F58F9.4 981   IV: 6231044-6231123

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58F9.4.1 6231023 6232607 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126223   101   IV: 6231023-6231123 Caenorhabditis elegans
Exon126224   166   IV: 6231177-6231342 Caenorhabditis elegans
Exon126225   131   IV: 6231389-6231519 Caenorhabditis elegans
Exon126226   163   IV: 6231564-6231726 Caenorhabditis elegans
Exon126227   77   IV: 6231810-6231886 Caenorhabditis elegans
Exon126228   73   IV: 6231931-6232003 Caenorhabditis elegans
Exon126230   174   IV: 6232044-6232217 Caenorhabditis elegans
Exon126231   304   IV: 6232304-6232607 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58F9.4.1 6231023 6232607 1

1 Sequence

Length
1189

1 Sequence Ontology Term

Identifier Name Description
transcript