WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13A10.9.1 Sequence Name  T13A10.9.1
Length (nt)  1198   Chromosome Location  IV: 6269773-6272023
Chromosome . Primary Identifier  IV Chromosome Location . Start  6269773
Chromosome Location . End  6272023 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13A10.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005742 srv-31 T13A10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13A10.9 T13A10.9 975   IV: 6269996-6270082

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.9.1 6269773 6272023 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126346   310   IV: 6269773-6270082 Caenorhabditis elegans
Exon126348   144   IV: 6270133-6270276 Caenorhabditis elegans
Exon126349   112   IV: 6270321-6270432 Caenorhabditis elegans
Exon126352   110   IV: 6270970-6271079 Caenorhabditis elegans
Exon126353   369   IV: 6271147-6271515 Caenorhabditis elegans
Exon126355   153   IV: 6271871-6272023 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13A10.9.1 6269773 6272023 -1

1 Sequence

Length
1198

1 Sequence Ontology Term

Identifier Name Description
transcript