WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C43G2.1c Sequence Name  C43G2.1c
Length (nt)  1323   Chromosome Location  IV: 6552901-6553014
Chromosome . Primary Identifier  IV Chromosome Location . Start  6552901
Chromosome Location . End  6553014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52748 PAQR-1, isoform c 50.5 440 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00082923
WBRNAi00042394
WBRNAi00011890

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C43G2.1c 6552901 6553014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016610 paqr-1 C43G2.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C43G2.1c 6552901 6553014 -1
CDS:C43G2.1c 6553062 6553228 -1
CDS:C43G2.1c 6553270 6553609 -1
CDS:C43G2.1c 6554243 6554414 -1
CDS:C43G2.1c 6554462 6554671 -1
CDS:C43G2.1c 6554728 6554954 -1
CDS:C43G2.1c 6555339 6555431 -1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C43G2.1c.1 C43G2.1c.1 1804   IV: 6552425-6555436