WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43G2.5b.1 Sequence Name  C43G2.5b.1
Length (nt)  792   Chromosome Location  IV: 6557431-6560881
Chromosome . Primary Identifier  IV Chromosome Location . Start  6557431
Chromosome Location . End  6560881 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006621 try-3 C43G2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.5b C43G2.5b 792   IV: 6557431-6557531

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.5b.1 6557431 6560881 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127335   101   IV: 6557431-6557531 Caenorhabditis elegans
Exon127337   136   IV: 6558032-6558167 Caenorhabditis elegans
Exon127339   121   IV: 6558500-6558620 Caenorhabditis elegans
Exon127341   170   IV: 6558861-6559030 Caenorhabditis elegans
Exon127345   118   IV: 6559224-6559341 Caenorhabditis elegans
Exon127347   146   IV: 6560736-6560881 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.5b.1 6557431 6560881 1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
transcript