WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F38A5.3b Sequence Name  F38A5.3b
Length (nt)  1299   Chromosome Location  IV: 6588235-6590136
Chromosome . Primary Identifier  IV Chromosome Location . Start  6588235
Chromosome Location . End  6590136 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.3b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A5.3b 6588235 6590136 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127476   251   IV: 6588235-6588485 Caenorhabditis elegans
Exon127478   935   IV: 6588554-6589488 Caenorhabditis elegans
Exon127481   89   IV: 6589975-6590063 Caenorhabditis elegans
Exon127482   24   IV: 6590113-6590136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A5.3b 6588235 6590136 -1

1 Sequence

Length
1299

1 Sequence Ontology Term

Identifier Name Description
transcript