WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H12.13b.1 Sequence Name  C17H12.13b.1
Length (nt)  1012   Chromosome Location  IV: 6778153-6779787
Chromosome . Primary Identifier  IV Chromosome Location . Start  6778153
Chromosome Location . End  6779787 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H12.13b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015938 anat-1 C17H12.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H12.13b C17H12.13b 693   IV: 6778155-6778288

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.13b.1 6778153 6779787 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127942   136   IV: 6778153-6778288 Caenorhabditis elegans
Exon127944   274   IV: 6778347-6778620 Caenorhabditis elegans
Exon127946   74   IV: 6778672-6778745 Caenorhabditis elegans
Exon127948   97   IV: 6778794-6778890 Caenorhabditis elegans
Exon127949   431   IV: 6779357-6779787 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.13b.1 6778153 6779787 1

1 Sequence

Length
1012

1 Sequence Ontology Term

Identifier Name Description
transcript