WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C17H12.1b Sequence Name  C17H12.1b
Length (nt)  1920   Chromosome Location  IV: 6780405-6780459
Chromosome . Primary Identifier  IV Chromosome Location . Start  6780405
Chromosome Location . End  6780459
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52993 DYCI-1, isoform b 71.5 639 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00095497
WBRNAi00099774
WBRNAi00071736
WBRNAi00090791
WBRNAi00091211
WBRNAi00091210
WBRNAi00087705
WBRNAi00029031
WBRNAi00100730
WBRNAi00071417
WBRNAi00099168
WBRNAi00099370
WBRNAi00099572
WBRNAi00024586
WBRNAi00040859
WBRNAi00008415
WBRNAi00087067
WBRNAi00087066
WBRNAi00087068
WBRNAi00099982
WBRNAi00110596
WBRNAi00100169
WBRNAi00100356
WBRNAi00087069
WBRNAi00087216
WBRNAi00063433
WBRNAi00100543
WBRNAi00100917
WBRNAi00110791

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C17H12.1b 6780405 6780459 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015927 dyci-1 C17H12.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C17H12.1b 6780405 6780459 -1
CDS:C17H12.1b 6780510 6780612 -1
CDS:C17H12.1b 6780700 6780808 -1
CDS:C17H12.1b 6781088 6781311 -1
CDS:C17H12.1b 6781543 6781678 -1
CDS:C17H12.1b 6781733 6781909 -1
CDS:C17H12.1b 6782514 6782729 -1
CDS:C17H12.1b 6782783 6783004 -1
CDS:C17H12.1b 6783113 6783309 -1
CDS:C17H12.1b 6783395 6783509 -1
CDS:C17H12.1b 6783606 6783800 -1
CDS:C17H12.1b 6784169 6784339 -1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C17H12.1b.2 C17H12.1b.2 2487   IV: 6779845-6784346
Transcript:C17H12.1b.1 C17H12.1b.1 2580   IV: 6779845-6785272