WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H7.2a.1 Sequence Name  R13H7.2a.1
Length (nt)  2218   Chromosome Location  IV: 6846065-6850979
Chromosome . Primary Identifier  IV Chromosome Location . Start  6846065
Chromosome Location . End  6850979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020069 R13H7.2 R13H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H7.2a R13H7.2a 1323   IV: 6846822-6846879

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H7.2a.1 6846065 6850979 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128185   815   IV: 6846065-6846879 Caenorhabditis elegans
Exon128193   83   IV: 6847457-6847539 Caenorhabditis elegans
Exon128207   75   IV: 6848308-6848382 Caenorhabditis elegans
Exon128214   105   IV: 6848628-6848732 Caenorhabditis elegans
Exon128224   94   IV: 6848775-6848868 Caenorhabditis elegans
Exon128235   182   IV: 6849114-6849295 Caenorhabditis elegans
Exon128245   190   IV: 6849341-6849530 Caenorhabditis elegans
Exon128255   206   IV: 6849582-6849787 Caenorhabditis elegans
Exon128266   162   IV: 6850236-6850397 Caenorhabditis elegans
Exon128276   55   IV: 6850446-6850500 Caenorhabditis elegans
Exon128287   251   IV: 6850729-6850979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H7.2a.1 6846065 6850979 -1

1 Sequence

Length
2218

1 Sequence Ontology Term

Identifier Name Description
transcript