WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H7.2i.1 Sequence Name  R13H7.2i.1
Length (nt)  1380   Chromosome Location  IV: 6846836-6850841
Chromosome . Primary Identifier  IV Chromosome Location . Start  6846836
Chromosome Location . End  6850841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H7.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020069 R13H7.2 R13H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H7.2i R13H7.2i 1380   IV: 6846836-6846879

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13H7.2i.1 6846836 6850841 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128191   44   IV: 6846836-6846879 Caenorhabditis elegans
Exon128202   83   IV: 6847457-6847539 Caenorhabditis elegans
Exon128206   146   IV: 6848237-6848382 Caenorhabditis elegans
Exon128223   105   IV: 6848628-6848732 Caenorhabditis elegans
Exon128233   94   IV: 6848775-6848868 Caenorhabditis elegans
Exon128244   182   IV: 6849114-6849295 Caenorhabditis elegans
Exon128254   190   IV: 6849341-6849530 Caenorhabditis elegans
Exon128264   206   IV: 6849582-6849787 Caenorhabditis elegans
Exon128275   162   IV: 6850236-6850397 Caenorhabditis elegans
Exon128285   55   IV: 6850446-6850500 Caenorhabditis elegans
Exon128286   113   IV: 6850729-6850841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13H7.2i.1 6846836 6850841 -1

1 Sequence

Length
1380

1 Sequence Ontology Term

Identifier Name Description
transcript