WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A12.2c Sequence Name  T05A12.2c
Length (nt)  1617   Chromosome Location  IV: 6876860-6877262
Chromosome . Primary Identifier  IV Chromosome Location . Start  6876860
Chromosome Location . End  6877262
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A12.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49303 TRE-2, isoform c 61.3 538 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052437
WBRNAi00018176
WBRNAi00035165

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A12.2c 6876860 6877262 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006608 tre-2 T05A12.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A12.2c 6876860 6877262 -1
CDS:T05A12.2c 6877313 6877584 -1
CDS:T05A12.2c 6877632 6877848 -1
CDS:T05A12.2c 6877902 6878089 -1
CDS:T05A12.2c 6878140 6878284 -1
CDS:T05A12.2c 6878334 6878447 -1
CDS:T05A12.2c 6878496 6878575 -1
CDS:T05A12.2c 6878631 6878717 -1
CDS:T05A12.2c 6878767 6878877 -1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A12.2c.1 T05A12.2c.1 1617   IV: 6876860-6878877