WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC477.9e Sequence Name  ZC477.9e
Length (nt)  3240   Chromosome Location  IV: 7085688-7085857
Chromosome . Primary Identifier  IV Chromosome Location . Start  7085688
Chromosome Location . End  7085857
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC477.9e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49210 DEB-1, isoform e 119.6 1079 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00058962
WBRNAi00099871
WBRNAi00100517
WBRNAi00027597
WBRNAi00109637
WBRNAi00109249
WBRNAi00100891
WBRNAi00099265
WBRNAi00099669
WBRNAi00099467
WBRNAi00080643
WBRNAi00100143
WBRNAi00113651
WBRNAi00109346
WBRNAi00100330
WBRNAi00113650
WBRNAi00100704
WBRNAi00101078
WBRNAi00091679
WBRNAi00091694
WBRNAi00091709
WBRNAi00091724
WBRNAi00091739
WBRNAi00091754
WBRNAi00091775
WBRNAi00109540
WBRNAi00113652
WBRNAi00109443

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC477.9e 7085688 7085857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000942 deb-1 ZC477.9 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC477.9e 7085688 7085857 -1
CDS:ZC477.9e 7086183 7086273 -1
CDS:ZC477.9e 7086327 7086428 -1
CDS:ZC477.9e 7086477 7086851 -1
CDS:ZC477.9e 7087469 7087671 -1
CDS:ZC477.9e 7089287 7089479 -1
CDS:ZC477.9e 7089537 7089621 -1
CDS:ZC477.9e 7089830 7090137 -1
CDS:ZC477.9e 7090241 7090412 -1
CDS:ZC477.9e 7090514 7090621 -1
CDS:ZC477.9e 7090673 7091382 -1
CDS:ZC477.9e 7091430 7091627 -1
CDS:ZC477.9e 7091678 7091797 -1
CDS:ZC477.9e 7092417 7092524 -1
CDS:ZC477.9e 7092787 7093026 -1
CDS:ZC477.9e 7094210 7094266 -1

1 Sequence

Length
3240

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC477.9e.1 ZC477.9e.1 3240   IV: 7085688-7094266