WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14e.2 Sequence Name  C34D4.14e.2
Length (nt)  8458   Chromosome Location  IV: 7134346-7144570
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134346
Chromosome Location . End  7144570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14e C34D4.14e 7941   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14e.2 7134346 7144570 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129137   619   IV: 7134346-7134964 Caenorhabditis elegans
Exon129152   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129162   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129172   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129182   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129192   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129202   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129212   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129222   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129232   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129242   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129252   267   IV: 7140801-7141067 Caenorhabditis elegans
Exon129262   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129274   126   IV: 7141353-7141478 Caenorhabditis elegans
Exon129282   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129292   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129304   151   IV: 7142822-7142972 Caenorhabditis elegans
Exon129310   165   IV: 7143145-7143309 Caenorhabditis elegans
Exon129322   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129332   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129344   364   IV: 7144207-7144570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14e.2 7134346 7144570 -1

1 Sequence

Length
8458

1 Sequence Ontology Term

Identifier Name Description
transcript