WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14g.1 Sequence Name  C34D4.14g.1
Length (nt)  8466   Chromosome Location  IV: 7134346-7144720
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134346
Chromosome Location . End  7144720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14g C34D4.14g 7842   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14g.1 7134346 7144720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129140   619   IV: 7134346-7134964 Caenorhabditis elegans
Exon129154   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129164   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129174   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129184   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129194   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129204   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129214   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129224   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129234   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129244   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129254   267   IV: 7140801-7141067 Caenorhabditis elegans
Exon129264   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129270   138   IV: 7141341-7141478 Caenorhabditis elegans
Exon129284   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129294   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129298   130   IV: 7142822-7142951 Caenorhabditis elegans
Exon129314   75   IV: 7143235-7143309 Caenorhabditis elegans
Exon129324   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129334   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129342   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129353   109   IV: 7144612-7144720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14g.1 7134346 7144720 -1

1 Sequence

Length
8466

1 Sequence Ontology Term

Identifier Name Description
transcript