WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42C5.5a Sequence Name  F42C5.5a
Length (nt)  993   Chromosome Location  IV: 7292602-7292652
Chromosome . Primary Identifier  IV Chromosome Location . Start  7292602
Chromosome Location . End  7292652
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49457 F42C5.5, isoform a 37.9 330 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00047086

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42C5.5a 7292602 7292652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018347 F42C5.5 F42C5.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42C5.5a 7292602 7292652 -1
CDS:F42C5.5a 7292703 7293067 -1
CDS:F42C5.5a 7293118 7293508 -1
CDS:F42C5.5a 7293967 7294117 -1
CDS:F42C5.5a 7294163 7294197 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42C5.5a.1 F42C5.5a.1 1085   IV: 7292534-7294221