WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F45E4.3b Sequence Name  F45E4.3b
Length (nt)  25584   Chromosome Location  IV: 7588931-7588956
Chromosome . Primary Identifier  IV Chromosome Location . Start  7588931
Chromosome Location . End  7588956
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51026 CLA-1, isoform b 955.7 8527 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00046149
WBRNAi00047408
WBRNAi00055762
WBRNAi00080492
WBRNAi00014228
WBRNAi00015022
WBRNAi00015023
WBRNAi00019053
WBRNAi00032305

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3b 7588931 7588956 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018468 cla-1 F45E4.3 Caenorhabditis elegans

33 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3b 7588931 7588956 1
CDS:F45E4.3b 7589013 7589091 1
CDS:F45E4.3b 7589206 7589431 1
CDS:F45E4.3b 7589843 7589971 1
CDS:F45E4.3b 7590021 7590190 1
CDS:F45E4.3b 7590239 7590483 1
CDS:F45E4.3b 7590530 7590627 1
CDS:F45E4.3b 7590673 7596560 1
CDS:F45E4.3b 7596625 7597245 1
CDS:F45E4.3b 7597249 7598923 1
CDS:F45E4.3b 7598928 7605622 1
CDS:F45E4.3b 7605698 7605810 1
CDS:F45E4.3b 7606453 7606659 1
CDS:F45E4.3b 7606708 7606860 1
CDS:F45E4.3b 7607950 7610434 1
CDS:F45E4.3b 7610650 7610762 1
CDS:F45E4.3b 7610836 7610897 1
CDS:F45E4.3b 7611276 7611344 1
CDS:F45E4.3b 7611439 7611752 1
CDS:F45E4.3b 7612643 7612687 1
CDS:F45E4.3b 7612960 7613009 1
CDS:F45E4.3b 7613055 7613102 1
CDS:F45E4.3b 7613223 7613639 1
CDS:F45E4.3b 7614014 7614526 1
CDS:F45E4.3b 7614574 7614858 1
CDS:F45E4.3b 7615133 7615481 1
CDS:F45E4.3b 7615730 7615919 1
CDS:F45E4.3b 7615964 7616048 1
CDS:F45E4.3b 7616487 7616695 1
CDS:F45E4.3b 7616752 7617332 1

1 Sequence

Length
25584

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.3b.1 F45E4.3b.1 25584   IV: 7588931-7623552