WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.3a.1 Sequence Name  F45E4.3a.1
Length (nt)  27002   Chromosome Location  IV: 7588931-7628238
Chromosome . Primary Identifier  IV Chromosome Location . Start  7588931
Chromosome Location . End  7628238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018468 cla-1 F45E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.3a F45E4.3a 26769   IV: 7588931-7588956

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F45E4.3a.1 7588931 7628238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

40 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131191   26   IV: 7588931-7588956 Caenorhabditis elegans
Exon131192   79   IV: 7589013-7589091 Caenorhabditis elegans
Exon131194   226   IV: 7589206-7589431 Caenorhabditis elegans
Exon131196   129   IV: 7589843-7589971 Caenorhabditis elegans
Exon131198   170   IV: 7590021-7590190 Caenorhabditis elegans
Exon131200   245   IV: 7590239-7590483 Caenorhabditis elegans
Exon131202   98   IV: 7590530-7590627 Caenorhabditis elegans
Exon131204   5888   IV: 7590673-7596560 Caenorhabditis elegans
Exon131206   621   IV: 7596625-7597245 Caenorhabditis elegans
Exon131208   1675   IV: 7597249-7598923 Caenorhabditis elegans
Exon131210   6695   IV: 7598928-7605622 Caenorhabditis elegans
Exon131213   113   IV: 7605698-7605810 Caenorhabditis elegans
Exon131215   207   IV: 7606453-7606659 Caenorhabditis elegans
Exon131217   153   IV: 7606708-7606860 Caenorhabditis elegans
Exon131219   2485   IV: 7607950-7610434 Caenorhabditis elegans
Exon131221   113   IV: 7610650-7610762 Caenorhabditis elegans
Exon131225   62   IV: 7610836-7610897 Caenorhabditis elegans
Exon131229   69   IV: 7611276-7611344 Caenorhabditis elegans
Exon131233   314   IV: 7611439-7611752 Caenorhabditis elegans
Exon131237   45   IV: 7612643-7612687 Caenorhabditis elegans
Exon131241   50   IV: 7612960-7613009 Caenorhabditis elegans
Exon131245   48   IV: 7613055-7613102 Caenorhabditis elegans
Exon131249   417   IV: 7613223-7613639 Caenorhabditis elegans
Exon131253   513   IV: 7614014-7614526 Caenorhabditis elegans
Exon131257   285   IV: 7614574-7614858 Caenorhabditis elegans
Exon131261   349   IV: 7615133-7615481 Caenorhabditis elegans
Exon131265   190   IV: 7615730-7615919 Caenorhabditis elegans
Exon131269   85   IV: 7615964-7616048 Caenorhabditis elegans
Exon131273   209   IV: 7616487-7616695 Caenorhabditis elegans
Exon131277   581   IV: 7616752-7617332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F45E4.3a.1 7588931 7628238 1

1 Sequence

Length
27002

1 Sequence Ontology Term

Identifier Name Description
transcript