WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F45E4.3d Sequence Name  F45E4.3d
Length (nt)  7929   Chromosome Location  IV: 7610680-7610762
Chromosome . Primary Identifier  IV Chromosome Location . Start  7610680
Chromosome Location . End  7610762
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.3d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49489 CLA-1, isoform d 295.2 2642 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00000628
WBRNAi00047406
WBRNAi00047407
WBRNAi00047408
WBRNAi00080492
WBRNAi00015022
WBRNAi00032305

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3d 7610680 7610762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018468 cla-1 F45E4.3 Caenorhabditis elegans

25 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3d 7610680 7610762 1
CDS:F45E4.3d 7610836 7610897 1
CDS:F45E4.3d 7611276 7611344 1
CDS:F45E4.3d 7611439 7611752 1
CDS:F45E4.3d 7612643 7612687 1
CDS:F45E4.3d 7612960 7613009 1
CDS:F45E4.3d 7613055 7613102 1
CDS:F45E4.3d 7613223 7613639 1
CDS:F45E4.3d 7614014 7614526 1
CDS:F45E4.3d 7614574 7614858 1
CDS:F45E4.3d 7615133 7615481 1
CDS:F45E4.3d 7615730 7615919 1
CDS:F45E4.3d 7615964 7616048 1
CDS:F45E4.3d 7616487 7616695 1
CDS:F45E4.3d 7616752 7617332 1
CDS:F45E4.3d 7617424 7618127 1
CDS:F45E4.3d 7618837 7619038 1
CDS:F45E4.3d 7621015 7623514 1
CDS:F45E4.3d 7624529 7624735 1
CDS:F45E4.3d 7624780 7624893 1
CDS:F45E4.3d 7626594 7626702 1
CDS:F45E4.3d 7626752 7627063 1
CDS:F45E4.3d 7627110 7627291 1
CDS:F45E4.3d 7627348 7627611 1
CDS:F45E4.3d 7627971 7628005 1

1 Sequence

Length
7929

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.3d.1 F45E4.3d.1 7929   IV: 7610680-7628005