WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45E4.2 Sequence Name  F45E4.2
Length (nt)  681   Chromosome Location  IV: 7633430-7633567
Chromosome . Primary Identifier  IV Chromosome Location . Start  7633430
Chromosome Location . End  7633567
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10494 PLP-1 25.5 226 Caenorhabditis elegans
 

Other

41 RNAi

WormBase ID
WBRNAi00080193
WBRNAi00080195
WBRNAi00080197
WBRNAi00080199
WBRNAi00080200
WBRNAi00080202
WBRNAi00047405
WBRNAi00013613
WBRNAi00032304
WBRNAi00080192
WBRNAi00062522
WBRNAi00080189
WBRNAi00080191
WBRNAi00080190
WBRNAi00104733
WBRNAi00104728
WBRNAi00104730
WBRNAi00104729
WBRNAi00104732
WBRNAi00104731
WBRNAi00104734
WBRNAi00104736
WBRNAi00104735
WBRNAi00104738
WBRNAi00104737
WBRNAi00104740
WBRNAi00104739
WBRNAi00104742
WBRNAi00104741
WBRNAi00104744

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.2 7633430 7633567 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004046 plp-1 F45E4.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.2 7633430 7633567 1
CDS:F45E4.2 7633613 7633729 1
CDS:F45E4.2 7633959 7634279 1
CDS:F45E4.2 7634327 7634431 1

1 Sequence

Length
681

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.2.1 F45E4.2.1 973   IV: 7633360-7634653