WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F45E4.10b Sequence Name  F45E4.10b
Length (nt)  2358   Chromosome Location  IV: 7646419-7646733
Chromosome . Primary Identifier  IV Chromosome Location . Start  7646419
Chromosome Location . End  7646733
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.10b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52292 NRDE-4, isoform b 91.9 785 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00047401
WBRNAi00047402
WBRNAi00007729
WBRNAi00015021
WBRNAi00069427
WBRNAi00077841
WBRNAi00032302
WBRNAi00115385

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.10b 7646419 7646733 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001584 nrde-4 F45E4.10 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.10b 7646419 7646733 -1
CDS:F45E4.10b 7647027 7647352 -1
CDS:F45E4.10b 7647399 7647487 -1
CDS:F45E4.10b 7647538 7647713 -1
CDS:F45E4.10b 7647762 7648100 -1
CDS:F45E4.10b 7648545 7648663 -1
CDS:F45E4.10b 7648709 7648784 -1
CDS:F45E4.10b 7648846 7648959 -1
CDS:F45E4.10b 7649008 7649316 -1
CDS:F45E4.10b 7649969 7650347 -1
CDS:F45E4.10b 7650395 7650468 -1
CDS:F45E4.10b 7654172 7654213 -1

1 Sequence

Length
2358

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.10b.1 F45E4.10b.1 2503   IV: 7646323-7654262