WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D4.2h.1 Sequence Name  F33D4.2h.1
Length (nt)  8824   Chromosome Location  IV: 7681425-7696923
Chromosome . Primary Identifier  IV Chromosome Location . Start  7681425
Chromosome Location . End  7696923 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2h.1 7681425 7696923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131470   44   IV: 7681425-7681468 Caenorhabditis elegans
Exon131476   144   IV: 7681709-7681852 Caenorhabditis elegans
Exon131482   208   IV: 7681906-7682113 Caenorhabditis elegans
Exon131488   150   IV: 7682273-7682422 Caenorhabditis elegans
Exon131494   288   IV: 7682825-7683112 Caenorhabditis elegans
Exon131500   159   IV: 7683159-7683317 Caenorhabditis elegans
Exon131506   158   IV: 7685672-7685829 Caenorhabditis elegans
Exon131514   53   IV: 7686062-7686114 Caenorhabditis elegans
Exon131520   122   IV: 7686160-7686281 Caenorhabditis elegans
Exon131526   201   IV: 7686329-7686529 Caenorhabditis elegans
Exon131532   447   IV: 7686699-7687145 Caenorhabditis elegans
Exon131538   140   IV: 7687190-7687329 Caenorhabditis elegans
Exon131544   234   IV: 7687534-7687767 Caenorhabditis elegans
Exon131550   120   IV: 7687817-7687936 Caenorhabditis elegans
Exon131556   316   IV: 7687983-7688298 Caenorhabditis elegans
Exon131562   795   IV: 7688347-7689141 Caenorhabditis elegans
Exon131568   1351   IV: 7689192-7690542 Caenorhabditis elegans
Exon131574   122   IV: 7690615-7690736 Caenorhabditis elegans
Exon131575   63   IV: 7690924-7690986 Caenorhabditis elegans
Exon131581   102   IV: 7691379-7691480 Caenorhabditis elegans
Exon131587   264   IV: 7691552-7691815 Caenorhabditis elegans
Exon131593   115   IV: 7692131-7692245 Caenorhabditis elegans
Exon131598   176   IV: 7692298-7692473 Caenorhabditis elegans
Exon131603   142   IV: 7692521-7692662 Caenorhabditis elegans
Exon131608   27   IV: 7692937-7692963 Caenorhabditis elegans
Exon131613   169   IV: 7693381-7693549 Caenorhabditis elegans
Exon131618   647   IV: 7693593-7694239 Caenorhabditis elegans
Exon131623   272   IV: 7694285-7694556 Caenorhabditis elegans
Exon131628   316   IV: 7694922-7695237 Caenorhabditis elegans
Exon131633   188   IV: 7695289-7695476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F33D4.2h.1 7681425 7696923 1

1 Sequence

Length
8824

1 Sequence Ontology Term

Identifier Name Description
transcript