WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C55F2.1a Sequence Name  C55F2.1a
Length (nt)  1161   Chromosome Location  IV: 7892718-7892730
Chromosome . Primary Identifier  IV Chromosome Location . Start  7892718
Chromosome Location . End  7892730
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55F2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49563 ATIC-1, isoform a 42.3 386 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043245
WBRNAi00002195
WBRNAi00012169
WBRNAi00030188

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C55F2.1a 7892718 7892730 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C55F2.1a 7892718 7892730 1
CDS:C55F2.1a 7892988 7893113 1
CDS:C55F2.1a 7893686 7893799 1
CDS:C55F2.1a 7893978 7894028 1
CDS:C55F2.1a 7894280 7894361 1
CDS:C55F2.1a 7894407 7894500 1
CDS:C55F2.1a 7894544 7894672 1
CDS:C55F2.1a 7894775 7894867 1
CDS:C55F2.1a 7895068 7895141 1
CDS:C55F2.1a 7898746 7898857 1
CDS:C55F2.1a 7898990 7899046 1
CDS:C55F2.1a 7899234 7899329 1
CDS:C55F2.1a 7899996 7900115 1

1 Sequence

Length
1161

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55F2.1a.1 C55F2.1a.1 2019   IV: 7882026-7900257
Transcript:C55F2.1a.2 C55F2.1a.2 1564   IV: 7891380-7900257