WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D12.1b.1 Sequence Name  F20D12.1b.1
Length (nt)  2604   Chromosome Location  IV: 7958613-7961663
Chromosome . Primary Identifier  IV Chromosome Location . Start  7958613
Chromosome Location . End  7961663 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017641 csr-1 F20D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D12.1b F20D12.1b 2604   IV: 7958613-7958758

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.1b.1 7958613 7961663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132469   146   IV: 7958613-7958758 Caenorhabditis elegans
Exon132472   154   IV: 7958800-7958953 Caenorhabditis elegans
Exon132475   212   IV: 7958997-7959208 Caenorhabditis elegans
Exon132478   152   IV: 7959253-7959404 Caenorhabditis elegans
Exon132481   386   IV: 7959452-7959837 Caenorhabditis elegans
Exon132484   722   IV: 7959883-7960604 Caenorhabditis elegans
Exon132487   100   IV: 7960649-7960748 Caenorhabditis elegans
Exon132490   357   IV: 7960793-7961149 Caenorhabditis elegans
Exon132493   189   IV: 7961200-7961388 Caenorhabditis elegans
Exon132496   89   IV: 7961432-7961520 Caenorhabditis elegans
Exon132497   97   IV: 7961567-7961663 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D12.1b.1 7958613 7961663 1

1 Sequence

Length
2604

1 Sequence Ontology Term

Identifier Name Description
transcript