WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57H12.4 Sequence Name  F57H12.4
Length (nt)  879   Chromosome Location  IV: 7971139-7971192
Chromosome . Primary Identifier  IV Chromosome Location . Start  7971139
Chromosome Location . End  7971192
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57H12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49586 FRPR-10 33.8 292 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00048915
WBRNAi00072215

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F57H12.4 7971139 7971192 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019019 frpr-10 F57H12.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F57H12.4 7971139 7971192 1
CDS:F57H12.4 7971349 7971551 1
CDS:F57H12.4 7972344 7972610 1
CDS:F57H12.4 7972732 7972878 1
CDS:F57H12.4 7973110 7973251 1
CDS:F57H12.4 7973298 7973363 1

1 Sequence

Length
879

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57H12.4.1 F57H12.4.1 2064   IV: 7957804-7973690
Transcript:F57H12.4.2 F57H12.4.2 1320   IV: 7961843-7973487
Transcript:F57H12.4.3 F57H12.4.3 1346   IV: 7965614-7973487
Transcript:F57H12.4.4 F57H12.4.4 1136   IV: 7970528-7973487