WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57H12.1.1 Sequence Name  F57H12.1.1
Length (nt)  940   Chromosome Location  IV: 7982526-7983852
Chromosome . Primary Identifier  IV Chromosome Location . Start  7982526
Chromosome Location . End  7983852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57H12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000183 arf-5 F57H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57H12.1 F57H12.1 543   IV: 7982545-7982595

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57H12.1.1 7982526 7983852 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132567   70   IV: 7982526-7982595 Caenorhabditis elegans
Exon132568   97   IV: 7982646-7982742 Caenorhabditis elegans
Exon132569   125   IV: 7982870-7982994 Caenorhabditis elegans
Exon132570   183   IV: 7983043-7983225 Caenorhabditis elegans
Exon132571   465   IV: 7983388-7983852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57H12.1.1 7982526 7983852 1

1 Sequence

Length
940

1 Sequence Ontology Term

Identifier Name Description
transcript