WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42H9AR.1.2 Sequence Name  Y42H9AR.1.2
Length (nt)  1901   Chromosome Location  IV: 8113393-8115679
Chromosome . Primary Identifier  IV Chromosome Location . Start  8113393
Chromosome Location . End  8115679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42H9AR.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021536 Y42H9AR.1 Y42H9AR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42H9AR.1 Y42H9AR.1 1521   IV: 8113506-8113568

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y42H9AR.1.2 8113393 8115679 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon132813   61   IV: 8113393-8113453 Caenorhabditis elegans
Exon132814   74   IV: 8113495-8113568 Caenorhabditis elegans
Exon132817   158   IV: 8113625-8113782 Caenorhabditis elegans
Exon132819   304   IV: 8113831-8114134 Caenorhabditis elegans
Exon132821   174   IV: 8114180-8114353 Caenorhabditis elegans
Exon132823   652   IV: 8114463-8115114 Caenorhabditis elegans
Exon132825   478   IV: 8115202-8115679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y42H9AR.1.2 8113393 8115679 1

1 Sequence

Length
1901

1 Sequence Ontology Term

Identifier Name Description
transcript