WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42G8.3c Sequence Name  F42G8.3c
Length (nt)  600   Chromosome Location  IV: 8147221-8147296
Chromosome . Primary Identifier  IV Chromosome Location . Start  8147221
Chromosome Location . End  8147296
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G8.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49503 PMK-2, isoform c 23.1 199 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00113181
WBRNAi00047125
WBRNAi00072271
WBRNAi00074352
WBRNAi00014842
WBRNAi00076414
WBRNAi00024316
WBRNAi00032153
WBRNAi00112951
WBRNAi00113096
WBRNAi00113150
WBRNAi00074354
WBRNAi00072270
WBRNAi00074353
WBRNAi00074355
WBRNAi00074356
WBRNAi00064195
WBRNAi00075945

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42G8.3c 8147221 8147296 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004056 pmk-2 F42G8.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42G8.3c 8147221 8147296 1
CDS:F42G8.3c 8147625 8147696 1
CDS:F42G8.3c 8147746 8147842 1
CDS:F42G8.3c 8147927 8148131 1
CDS:F42G8.3c 8148182 8148331 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42G8.3c.1 F42G8.3c.1 600   IV: 8147221-8148331