WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T09A12.3a Sequence Name  T09A12.3a
Length (nt)  2703   Chromosome Location  IV: 8213905-8214135
Chromosome . Primary Identifier  IV Chromosome Location . Start  8213905
Chromosome Location . End  8214135
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17232 OCR-2, isoform a 102.0 900 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052912
WBRNAi00018482

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T09A12.3a 8213905 8214135 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003839 ocr-2 T09A12.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T09A12.3a 8213905 8214135 -1
CDS:T09A12.3a 8214192 8214323 -1
CDS:T09A12.3a 8214370 8214486 -1
CDS:T09A12.3a 8214929 8215078 -1
CDS:T09A12.3a 8215156 8215569 -1
CDS:T09A12.3a 8215640 8215747 -1
CDS:T09A12.3a 8215792 8215859 -1
CDS:T09A12.3a 8216248 8216459 -1
CDS:T09A12.3a 8216654 8216736 -1
CDS:T09A12.3a 8216782 8217190 -1
CDS:T09A12.3a 8217260 8217780 -1
CDS:T09A12.3a 8218891 8219020 -1
CDS:T09A12.3a 8219909 8220036 -1

1 Sequence

Length
2703

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09A12.3a.1 T09A12.3a.1 2871   IV: 8213788-8220087