WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09G4.2a Sequence Name  C09G4.2a
Length (nt)  1746   Chromosome Location  IV: 8522672-8522736
Chromosome . Primary Identifier  IV Chromosome Location . Start  8522672
Chromosome Location . End  8522736
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31156 PKG-2, isoform a 67.0 581 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040227
WBRNAi00064591
WBRNAi00010545
WBRNAi00103178

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09G4.2a 8522672 8522736 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015650 pkg-2 C09G4.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09G4.2a 8522672 8522736 1
CDS:C09G4.2a 8523293 8523459 1
CDS:C09G4.2a 8523520 8523633 1
CDS:C09G4.2a 8525022 8525260 1
CDS:C09G4.2a 8532085 8532158 1
CDS:C09G4.2a 8535856 8535978 1
CDS:C09G4.2a 8536341 8536562 1
CDS:C09G4.2a 8536618 8536707 1
CDS:C09G4.2a 8536905 8537210 1
CDS:C09G4.2a 8537263 8537340 1
CDS:C09G4.2a 8537472 8537739 1

1 Sequence

Length
1746

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09G4.2a.1 C09G4.2a.1 2263   IV: 8522603-8538187