WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59H11AR.4.1 Sequence Name  Y59H11AR.4.1
Length (nt)  1822   Chromosome Location  IV: 8598502-8600762
Chromosome . Primary Identifier  IV Chromosome Location . Start  8598502
Chromosome Location . End  8600762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59H11AR.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022012 Y59H11AR.4 Y59H11AR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59H11AR.4 Y59H11AR.4 1398   IV: 8598906-8599120

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.4.1 8598502 8600762 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134062   619   IV: 8598502-8599120 Caenorhabditis elegans
Exon134066   53   IV: 8599171-8599223 Caenorhabditis elegans
Exon134067   217   IV: 8599288-8599504 Caenorhabditis elegans
Exon134068   207   IV: 8599557-8599763 Caenorhabditis elegans
Exon134069   154   IV: 8599812-8599965 Caenorhabditis elegans
Exon134070   91   IV: 8600011-8600101 Caenorhabditis elegans
Exon134071   189   IV: 8600147-8600335 Caenorhabditis elegans
Exon134072   75   IV: 8600381-8600455 Caenorhabditis elegans
Exon134073   97   IV: 8600503-8600599 Caenorhabditis elegans
Exon134074   120   IV: 8600643-8600762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.4.1 8598502 8600762 -1

1 Sequence

Length
1822

1 Sequence Ontology Term

Identifier Name Description
transcript