WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C33D9.1b Sequence Name  C33D9.1b
Length (nt)  2481   Chromosome Location  IV: 8799469-8799684
Chromosome . Primary Identifier  IV Chromosome Location . Start  8799469
Chromosome Location . End  8799684
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D9.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30499 EXC-5, isoform b 94.3 826 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00063346
WBRNAi00001483
WBRNAi00041756
WBRNAi00024713
WBRNAi00027205
WBRNAi00011529

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C33D9.1b 8799469 8799684 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001366 exc-5 C33D9.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C33D9.1b 8799469 8799684 -1
CDS:C33D9.1b 8799737 8799820 -1
CDS:C33D9.1b 8800016 8800244 -1
CDS:C33D9.1b 8800297 8800370 -1
CDS:C33D9.1b 8800416 8800601 -1
CDS:C33D9.1b 8800659 8800898 -1
CDS:C33D9.1b 8800951 8801287 -1
CDS:C33D9.1b 8801338 8801489 -1
CDS:C33D9.1b 8801597 8801845 -1
CDS:C33D9.1b 8801894 8801978 -1
CDS:C33D9.1b 8802582 8802711 -1
CDS:C33D9.1b 8802761 8802839 -1
CDS:C33D9.1b 8802891 8803016 -1
CDS:C33D9.1b 8803964 8804128 -1
CDS:C33D9.1b 8804676 8804804 -1

1 Sequence

Length
2481

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C33D9.1b.1 C33D9.1b.1 2861   IV: 8799089-8804804