WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28C6.4 Sequence Name  T28C6.4
Length (nt)  900   Chromosome Location  IV: 8823006-8823824
Chromosome . Primary Identifier  IV Chromosome Location . Start  8823006
Chromosome Location . End  8823824
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03749 COL-3 28.6 299 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00026424
WBRNAi00027488
WBRNAi00019391
WBRNAi00071907
WBRNAi00036077
WBRNAi00071434
WBRNAi00054396
WBRNAi00023620

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28C6.4 8823006 8823824 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000691 col-117 T28C6.4 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28C6.4 8823006 8823824 -1
CDS:T28C6.4 8824084 8824164 -1

1 Sequence

Length
900

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28C6.4.1 T28C6.4.1 975   IV: 8822962-8824195