WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.6.1 Sequence Name  T28C6.6.1
Length (nt)  972   Chromosome Location  IV: 8824783-8826013
Chromosome . Primary Identifier  IV Chromosome Location . Start  8824783
Chromosome Location . End  8826013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000594 col-3 T28C6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.6 T28C6.6 900   IV: 8824814-8824894

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.6.1 8824783 8826013 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134939   112   IV: 8824783-8824894 Caenorhabditis elegans
Exon134940   860   IV: 8825154-8826013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.6.1 8824783 8826013 1

1 Sequence

Length
972

1 Sequence Ontology Term

Identifier Name Description
transcript