WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C27B7.8 Sequence Name  C27B7.8
Length (nt)  567   Chromosome Location  IV: 8916885-8916986
Chromosome . Primary Identifier  IV Chromosome Location . Start  8916885
Chromosome Location . End  8916986
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27B7.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03037 RAP-1 21.2 188 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00107765
WBRNAi00041321
WBRNAi00099878
WBRNAi00100364
WBRNAi00011246
WBRNAi00029261
WBRNAi00100738
WBRNAi00099676
WBRNAi00099272
WBRNAi00099474
WBRNAi00093200
WBRNAi00061738
WBRNAi00099990
WBRNAi00100177
WBRNAi00100551
WBRNAi00100925

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C27B7.8 8916885 8916986 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004307 rap-1 C27B7.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C27B7.8 8916885 8916986 -1
CDS:C27B7.8 8917762 8917902 -1
CDS:C27B7.8 8917951 8918091 -1
CDS:C27B7.8 8918141 8918197 -1
CDS:C27B7.8 8918600 8918668 -1
CDS:C27B7.8 8918718 8918774 -1

1 Sequence

Length
567

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C27B7.8.1 C27B7.8.1 1318   IV: 8916250-8918890