WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1a.3 Sequence Name  D1046.1a.3
Length (nt)  2026   Chromosome Location  IV: 8926327-8930348
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926327
Chromosome Location . End  8930348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1a D1046.1a 1470   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.3 8926327 8930348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135363   99   IV: 8926327-8926425 Caenorhabditis elegans
Exon135377   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135388   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135400   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135412   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135427   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135445   103   IV: 8927924-8928026 Caenorhabditis elegans
Exon135453   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135466   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135480   114   IV: 8928987-8929100 Caenorhabditis elegans
Exon135492   106   IV: 8929148-8929253 Caenorhabditis elegans
Exon135499   233   IV: 8929816-8930048 Caenorhabditis elegans
Exon135509   133   IV: 8930216-8930348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.3 8926327 8930348 1

1 Sequence

Length
2026

1 Sequence Ontology Term

Identifier Name Description
transcript