WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1a.5 Sequence Name  D1046.1a.5
Length (nt)  2750   Chromosome Location  IV: 8926328-8930344
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926328
Chromosome Location . End  8930344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1a.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1a D1046.1a 1470   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.5 8926328 8930344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135365   98   IV: 8926328-8926425 Caenorhabditis elegans
Exon135379   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135390   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135402   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135414   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135429   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135447   103   IV: 8927924-8928026 Caenorhabditis elegans
Exon135455   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135468   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135481   114   IV: 8928987-8929100 Caenorhabditis elegans
Exon135497   1197   IV: 8929148-8930344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.5 8926328 8930344 1

1 Sequence

Length
2750

1 Sequence Ontology Term

Identifier Name Description
transcript