WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1c.2 Sequence Name  D1046.1c.2
Length (nt)  2196   Chromosome Location  IV: 8926328-8930346
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926328
Chromosome Location . End  8930346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1c D1046.1c 1476   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1c.2 8926328 8930346 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135368   98   IV: 8926328-8926425 Caenorhabditis elegans
Exon135382   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135394   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135406   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135418   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135433   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135439   109   IV: 8927918-8928026 Caenorhabditis elegans
Exon135459   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135472   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135484   114   IV: 8928987-8929100 Caenorhabditis elegans
Exon135495   106   IV: 8929148-8929253 Caenorhabditis elegans
Exon135503   531   IV: 8929816-8930346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1c.2 8926328 8930346 1

1 Sequence

Length
2196

1 Sequence Ontology Term

Identifier Name Description
transcript