WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1a.1 Sequence Name  D1046.1a.1
Length (nt)  1889   Chromosome Location  IV: 8926335-8930052
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926335
Chromosome Location . End  8930052 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1a D1046.1a 1470   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.1 8926335 8930052 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135372   91   IV: 8926335-8926425 Caenorhabditis elegans
Exon135375   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135386   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135398   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135410   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135425   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135443   103   IV: 8927924-8928026 Caenorhabditis elegans
Exon135451   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135464   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135478   114   IV: 8928987-8929100 Caenorhabditis elegans
Exon135490   106   IV: 8929148-8929253 Caenorhabditis elegans
Exon135502   237   IV: 8929816-8930052 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.1 8926335 8930052 1

1 Sequence

Length
1889

1 Sequence Ontology Term

Identifier Name Description
transcript