WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D6.7.1 Sequence Name  C53D6.7.1
Length (nt)  1018   Chromosome Location  IV: 9034845-9037163
Chromosome . Primary Identifier  IV Chromosome Location . Start  9034845
Chromosome Location . End  9037163 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008284 C53D6.7 C53D6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D6.7 C53D6.7 936   IV: 9034926-9035039

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.7.1 9034845 9037163 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135910   195   IV: 9034845-9035039 Caenorhabditis elegans
Exon135911   291   IV: 9035084-9035374 Caenorhabditis elegans
Exon135912   202   IV: 9035671-9035872 Caenorhabditis elegans
Exon135913   157   IV: 9036179-9036335 Caenorhabditis elegans
Exon135914   79   IV: 9036713-9036791 Caenorhabditis elegans
Exon135915   94   IV: 9037070-9037163 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.7.1 9034845 9037163 -1

1 Sequence

Length
1018

1 Sequence Ontology Term

Identifier Name Description
transcript