WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C12.7b.1 Sequence Name  F49C12.7b.1
Length (nt)  1505   Chromosome Location  IV: 9309118-9312927
Chromosome . Primary Identifier  IV Chromosome Location . Start  9309118
Chromosome Location . End  9312927 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C12.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009877 F49C12.7 F49C12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C12.7b F49C12.7b 1347   IV: 9309276-9309407

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C12.7b.1 9309118 9312927 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136821   290   IV: 9309118-9309407 Caenorhabditis elegans
Exon136824   75   IV: 9309457-9309531 Caenorhabditis elegans
Exon136827   168   IV: 9309703-9309870 Caenorhabditis elegans
Exon136830   540   IV: 9309971-9310510 Caenorhabditis elegans
Exon136833   83   IV: 9310560-9310642 Caenorhabditis elegans
Exon136836   115   IV: 9310829-9310943 Caenorhabditis elegans
Exon136840   163   IV: 9310995-9311157 Caenorhabditis elegans
Exon136842   71   IV: 9312857-9312927 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C12.7b.1 9309118 9312927 -1

1 Sequence

Length
1505

1 Sequence Ontology Term

Identifier Name Description
transcript