WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E11.4.1 Sequence Name  F38E11.4.1
Length (nt)  3365   Chromosome Location  IV: 9449125-9457500
Chromosome . Primary Identifier  IV Chromosome Location . Start  9449125
Chromosome Location . End  9457500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009541 cutl-17 F38E11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E11.4 F38E11.4 2739   IV: 9449589-9449923

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.4.1 9449125 9457500 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon137567   799   IV: 9449125-9449923 Caenorhabditis elegans
Exon137569   94   IV: 9450678-9450771 Caenorhabditis elegans
Exon137570   90   IV: 9451069-9451158 Caenorhabditis elegans
Exon137585   157   IV: 9453663-9453819 Caenorhabditis elegans
Exon137586   106   IV: 9453865-9453970 Caenorhabditis elegans
Exon137587   113   IV: 9454028-9454140 Caenorhabditis elegans
Exon137588   248   IV: 9454187-9454434 Caenorhabditis elegans
Exon137589   540   IV: 9454515-9455054 Caenorhabditis elegans
Exon137590   158   IV: 9455232-9455389 Caenorhabditis elegans
Exon137591   69   IV: 9455581-9455649 Caenorhabditis elegans
Exon137592   222   IV: 9455693-9455914 Caenorhabditis elegans
Exon137593   282   IV: 9456037-9456318 Caenorhabditis elegans
Exon137594   142   IV: 9456538-9456679 Caenorhabditis elegans
Exon137595   137   IV: 9456732-9456868 Caenorhabditis elegans
Exon137596   208   IV: 9457293-9457500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E11.4.1 9449125 9457500 -1

1 Sequence

Length
3365

1 Sequence Ontology Term

Identifier Name Description
transcript