WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38E11.3 Sequence Name  F38E11.3
Length (nt)  1275   Chromosome Location  IV: 9451340-9451648
Chromosome . Primary Identifier  IV Chromosome Location . Start  9451340
Chromosome Location . End  9451648
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E11.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26624 CPIN-1 47.7 424 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00080889
WBRNAi00046718
WBRNAi00014569
WBRNAi00031966

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38E11.3 9451340 9451648 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000775 cpin-1 F38E11.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38E11.3 9451340 9451648 1
CDS:F38E11.3 9451821 9451906 1
CDS:F38E11.3 9451956 9452310 1
CDS:F38E11.3 9452544 9452682 1
CDS:F38E11.3 9452729 9452847 1
CDS:F38E11.3 9452952 9453065 1
CDS:F38E11.3 9453115 9453267 1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38E11.3.2 F38E11.3.2 1467   IV: 9450675-9453409
Transcript:F38E11.3.1 F38E11.3.1 1386   IV: 9451334-9453372