WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W09C2.1b Sequence Name  W09C2.1b
Length (nt)  1251   Chromosome Location  IV: 9616006-9616156
Chromosome . Primary Identifier  IV Chromosome Location . Start  9616006
Chromosome Location . End  9616156
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C2.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03799 ELT-1, isoform b 44.8 416 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00114273
WBRNAi00114038
WBRNAi00114117
WBRNAi00114196
WBRNAi00084826
WBRNAi00009272
WBRNAi00026521
WBRNAi00055017
WBRNAi00084827
WBRNAi00114079
WBRNAi00114236
WBRNAi00102033
WBRNAi00069788
WBRNAi00084828
WBRNAi00115817
WBRNAi00077694
WBRNAi00107524
WBRNAi00114000
WBRNAi00114158
WBRNAi00087105
WBRNAi00087107
WBRNAi00087106
WBRNAi00030239
WBRNAi00063909
WBRNAi00064272
WBRNAi00087108
WBRNAi00077755
WBRNAi00103572
WBRNAi00107226
WBRNAi00107120

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W09C2.1b 9616006 9616156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W09C2.1b 9616006 9616156 1
CDS:W09C2.1b 9616326 9616433 1
CDS:W09C2.1b 9616837 9617205 1
CDS:W09C2.1b 9617259 9617413 1
CDS:W09C2.1b 9618505 9618633 1
CDS:W09C2.1b 9619320 9619658 1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W09C2.1b.1 W09C2.1b.1 1882   IV: 9615997-9620280