WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H27C11.1b Sequence Name  H27C11.1b
Length (nt)  1020   Chromosome Location  IV: 9761184-9761196
Chromosome . Primary Identifier  IV Chromosome Location . Start  9761184
Chromosome Location . End  9761196
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27C11.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39262 NHR-97, isoform b 38.1 339 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00049500
WBRNAi00016325
WBRNAi00033757
WBRNAi00115819
WBRNAi00092861

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H27C11.1b 9761184 9761196 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003687 nhr-97 H27C11.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:H27C11.1b 9761184 9761196 1
CDS:H27C11.1b 9761252 9761349 1
CDS:H27C11.1b 9762194 9762496 1
CDS:H27C11.1b 9762544 9762802 1
CDS:H27C11.1b 9763153 9763307 1
CDS:H27C11.1b 9763368 9763559 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H27C11.1b.2 H27C11.1b.2 4452   IV: 9757642-9764499
Transcript:H27C11.1b.1 H27C11.1b.1 1935   IV: 9760154-9764494